[0001] The invention relates to chromatographic separation and fractionation.
[0002] A chromatography column can be used to separate different compounds in a sample being flushed through the column in a solvent. The different compounds in the sample are delayed in passage through the column to different extents and exit the column at different times. A fraction collector directs a first part of the sample leaving the column to one fraction-collecting well, the second part to a second well and so on. A detector can be used to detect absorption or another characteristic of the sample during the processing of the sample downstream of the column and upstream of the fraction collector in order to detect the presence of different compounds in the stream from the column and to decide when to begin and terminate collection, and when to advance the fraction collector to a new well.
[0003] In a chromatography system available from the Biotage Inc. under the Parallex Flex and Horizon designation, sampling can be initiated and terminated based upon the V absorbance values or based upon the slopes of these values over time. A fraction cut can be triggered by collected volume (i.e., when a well has been filled to capacity) and by detection of a valley between peaks based upon detection of a change in slope from a negative value to a positive value.
[0004] In one aspect, the invention features, in general, a chromatography system including a chromatography column connected to receive a sample and separate different compounds in the sample, a detector that outputs a signal indicating the presence of compounds in the sample leaving the column, a fraction collector that directs fractions of the sample from the column to separate fraction wells, and an electronic controller that receives inputs from the detector and controls the fraction collector. The electronic controller monitors the signal from the detector over time and initiates a cut from one well to another at the fraction collector when the signal over time experiences a shoulder where the slope of the signal over time does not change in sign but does change by more than a predetermined amount, and the slope is negative
[0005] In another aspect, the invention features, in general, a chromatography system including a chromatography column, a flow-through detector, and a fraction collector as already described. The system also includes an electronic controller that monitors the signal from the detector over time and initiates a cut from one well to another at the fraction collector when the slope is positive and experiences a shoulder as determined by a positive slope at one point in time that is less than a slope threshold, and a positive slope at a later time that is greater than X times the slope threshold, where X is greater than one (preferably greater than 1.5 and most preferably between 1.5 and 2.5).
[0006] In another aspect, the invention features, in general, a chromatography system including a chromatography column, a flow-through detector, and a fraction collector. The system also includes an electronic controller that monitors the signal from the detector over time and initiates a cut from one well to another at the fraction collector when the signal is less than a slope detection disable threshold and the signal over time experiences a specified change in slope condition.
[0007] In another aspect, the invention features, in general, a chromatography system including a chromatography column, a flow-through detector, and a fraction collector. The system also includes an electronic controller that monitors the signal from the detector over time and identifies valleys in the signal from the detector over time. The system also includes a user interactive display and input device that permits the user to select whether or not to collect during valleys in the signal over time, and the controller either ends collection after identifying a valley or causes a fraction cut at a set time.
[0008] In another aspect, the invention features, in general a chromatography system including a chromatography column, a flow-through detector, a fraction collector, and an electronic controller that monitors the signal from the detector over time. The system also includes a user interactive display and input device that permits the user to select to operate in a custom mode in which the user determines setpoint conditions for initiating and ending collection or to operate in one of a set of preset collection modes in which the setpoint conditions for initiating and ending collection are preset.
[0009] Preferred embodiments of the invention may include one or more of the following features. In preferred embodiments the electronic controller determines if the signal is in a valley by the slope being positive at a set time delay past the cut when the slope is negative. The controller can cause the fraction collector to move to a new well after the set time delay. Alternately the controller can end collection after the set time delay. The system includes a user interactive display and input device that permits the user to enter the slope threshold, the slope disable detection threshold, the set time delay, and a threshold value for the signal for the controller to initiate and stop collection. The detector emits a signal measuing characteristics of the compound. For example, a UV absorbance detector emits a signal measuring the UV absorbance.
[0010] Embodiments of the invention may include one or more of the following advantages. The detection based on UV slope and changes in UV slope allows for more fine tuned control of the fractionation process, leading to higher purity in the chemical compounds collected and higher efficiencies. The user can enter various data to control the stop/start and cut point decision analysis, or can alternatively rely on preselected modes of operation.
[0011] Other advantages and features of the invention will be apparent from the following description of a particular embodiment and from the claims.
[0012]
[0013] FIGS.
[0014]
[0015] Referring to
[0016] In operation, a solution
[0017] A user can specify the operation of the fraction collection system in response to the UV absorbance signals via a graphical interactive user interface provided by monitor
[0018] In the threshold low, threshold medium or threshold high modes, selected by buttons
[0019] In the slope low, slope medium or slope high modes, selected by buttons
[0020] In the custom UV mode, selected by button
Set points (Symbol) Explanation 1. Value Threshold (T This is the value level minimum for value-based collection 2. Slope Threshold (S) This is the threshold slope that starts slope-based collection. 3. Slope Enable Threshold This is the value level minimum to consider slope-based (T collection 4. Slope Detection The threshold value for valley and shoulder collection. Disable Threshold Above this value valleys and shoulders are ignored; (T below they are considered and cut. 5. ValleyThreshold This is the slope trigger value for valley and shoulder SlopeLimit (T collection, typically much smaller than S. 6. SlopeCutCountLimit This adjusts sensitivity to turning off valley collection, (C with higher values resulting in higher fractions of the valleys being collected Collection Conditionals 7. ValleySlope These are Boolean values for slope-based and threshold 8. ValleyThreshold collection modes indicating whether to collect valleys in fractions or to send them to waste.
[0021] The conditions for starting collection, making a fraction cut (move from one well
Further Definitions Value of the absorbance at time n is A[n], where n is the sample (i.e., datapoint) number. Change in absorbance, slope, is dA[n] = A[n] − A[n − 1]. Time (sample number) at which downward shoulder cut was made is n K is the time delay in number of samples. Starting conditions for fraction collection Slope collection mode: dA[n] > S and A[n] > T Value collection mode: A[n] > T Fraction cutting conditions during fraction collection Upward shoulder cut: cut at time n + k, when A[n + k] < T and dA[n + k] > 2*T Downward shoulder cut: cut at time n, when A[n] < T Valley Cut: cut at time n, when dA[n Stopping conditions for fraction collection Slope collection mode: Stop at n: (1) if A[n] > T dA[n Value collection mode: Stop at n: (1) if A[n] < Tv or (2) if valley threshold is false and dA[n
[0022] These conditions will be described with reference to
[0023] Value Collection Mode
[0024] If a user wishes to operate in a value collection mode, he will set T
[0025] An upward shoulder cut (e.g., as indicated by vertical lines
[0026] A downward shoulder cut (e.g., as indicated by vertical lines
[0027] A “valley cut” can be made at a specified time after a downward shoulder cut has been made at time n
[0028] For further fraction collections to be made in a valley, the valley collection “YES” button
[0029] The other condition (condition (1) in the “stopping conditions for fraction collection” table above) that will cause stopping of fraction collection in the value collection mode is that the absorbance value A[n] goes below T
[0030] Slope Collection Mode
[0031] If a user wishes to operate in a slope collection mode, he will set S and T
[0032] If desired, the user can also specify fraction cutting based upon slopes when the changes in slope values indicate the existence of different compounds. The fraction cutting in the slope collection mode is the same as has already been described for the value collection mode. Thus the conditions in the “fraction cutting conditions” table apply in the slope collection mode as well.
[0033] The two situations for stopping collection in the slope collection mode are set forth in the “stopping conditions for fraction collection” table above. The first situation is when the absorbance value A[n] goes below the slope enable threshold T
[0034] By using real-time analysis of the UV absorbance data, the system enables separation of fractions accurately and automatically. The detection based on UV slope and changes in UV slope allows for more fine tuned control of the fractionation process, leading to higher purity in the compounds collected and higher efficiencies. This is particularly useful when separating a mixture of unknown compounds, such that the operator cannot select optimal solvents and absorption characteristics ahead of time.
[0035] Other embodiments of the invention are within the scope of the appended claims.